BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E04SP1|AL430061
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1611 1789 0.0
>3x_Contig1611
Length = 15286
Score = 1789 bits (900), Expect = 0.0
Identities = 910/916 (99%)
Strand = Plus / Minus
Query: 1 atcttagatttagatcactttaatggcagcagaagactaatactctgtttagttctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6998 atcttagatttagatcactttaatggcagcagaagactaatactctgtttagttctttgt 6939
Query: 61 tgctggtatcccagaaaaaaggaatggaatagctagttgtatagtgttgaacttgaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6938 tgctggtatcccagaaaaaaggaatggaatagctagttgtatagtgttgaacttgaaacc 6879
Query: 121 attcttctaaagggttagagtcacagggtaggtgggagaggaatccgttgtaaacttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6878 attcttctaaagggttagagtcacagggtaggtgggagaggaatccgttgtaaacttaac 6819
Query: 181 tccggatgcccactctatctagtttagtctagcatgtctaggaaattacgcggctatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6818 tccggatgcccactctatctagtttagtctagcatgtctaggaaattacgcggctatcat 6759
Query: 241 attgccatacgtaaaacgcacccmaattaaggtattattacagtatcaaggraacgttac 300
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 6758 attgccatacgtaaaacgcacccaaattaaggtattattacagtatcaaggaaacgttac 6699
Query: 301 cctttgataacaaagagaaaatatcaaaaaaaaaaaaaaaataactccggggggcagttc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6698 cctttgataacaaagagaaaatatcaaaaaaaaaaaaaaaataactccgaggggcagttc 6639
Query: 361 catctctgtgcttgaaaaagaaagggccctgcctaaaaatatcagacaatctcctgatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6638 catctctgtgcttgaaaaagaaagggccctgcctaaaaatatcagacaatctcctgatgg 6579
Query: 421 ccatgcgttcagcgcttaccagagagaaggggttaaggttaaattgttggttctactaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6578 ccatgcgttcagcgcttaccagagagaaggggttaaggttaaattgttggttctactaga 6519
Query: 481 gatgagattttatgttaatccagagtcttccagaaatgattaactaatagtacataattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6518 gatgagattttatgttaatccagagtcttccagaaatgattaactaatagtacataattt 6459
Query: 541 ggccatgggtcccactgtcaaatatttttttttggttcctgagctgctttcgttcctagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6458 ggccatgggtcccactgtcaaatatttttttttggttcctgagctgctttcgttcctagc 6399
Query: 601 gtcgctttttgattctttctgacgataatgctgtcagtctgcggctataataagacaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6398 gtcgctttttgattctttctgacgataatgctgtcagtctgcggctataataagacaagt 6339
Query: 661 cactccgtatattatgcggagtagacaacatttattgatattcgtcgcatagtggaaagt 720
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6338 cactccgtatattatgcggagtagacaacattttttgatattcgtcgcatagtggaaagt 6279
Query: 721 agactgacgagcgtgttaactggaaacacttccggcagcgctggactgtatccaacggga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6278 agactgacgagcgtgttaactggaaacacttccggcagcgctggactgtatccaacggga 6219
Query: 781 aatgggcgcggcaataaaaaatagtagataggaatwtrttactggtaggcggaaagcaat 840
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 6218 aatgggcgcggcaataaaaaatagtagataggaatttgttactggtaggcggaaagcaat 6159
Query: 841 agttgctagaaaacggaattgatacattgtagacattagggacaaaagcttattctcttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6158 agttgctagaaaacggaattgatacattgtagacattagggacaaaagcttattctcttt 6099
Query: 901 ccgcggcctatccgcg 916
||||||||||||||||
Sbjct: 6098 ccgcggcctatccgcg 6083
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,227
Number of Sequences: 1807
Number of extensions: 17227
Number of successful extensions: 2600
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)